Boston Cream Pie Cupcakes

Boston Cream Pie Cupcakes are the perfect blend of a classic dessert and a fun, bite-sized treat. These moist vanilla cupcakes are filled with a creamy vanilla pudding center and topped with rich chocolate ganache.

So if you need a show-stopping birthday dessert or a sweet afternoon sweet snack, these cupcakes from scratch are just what you need.

Cross-section of a boston cream pie cupcakes showing creamy vanilla center and chocolate topping

I first made these cupcakes when I wanted to bake something unique, creative, fancy, but still easy to make. The first time I tried them I knew I had a hit! Now I make them whenever I need a little “classy cupcakes” magic in my day!

If you like these Boston Cream Pie Cupcakes, I’m sure you’ll also enjoy my Neapolitan Cupcakes, Mini Tiramisu cakes, or Lemon Bars!

Seven ganache-topped cupcakes on a white platter beside a bowl of yellow pudding

Servings: 16 Cupcakes
Total time: 44 minutes
Calories: 230

Why You’ll Love This Recipe

  • Moist Vanilla Cupcakes: Made from a simple yellow cake mix but baked perfectly, no dry edges here!
  • Chocolate Ganache Top: Smooth, glossy, and easy to dip—like a mini chocolate mirror on each cupcake.
  • Cream-Filled Surprise: Bite into one and discover that creamy center, always a crowd-pleaser!

Ingredients

For the Cupcakes

  1. 1 package yellow cake mix
  2. 1 cup water
  3. ⅓ cup vegetable oil
  4. 3 large eggs

For the Cream Filling

  1. 1 (6-ounce) package instant vanilla pudding mix
  2. 2 cups cold milk

For the Chocolate Ganache

  1. ½ cup chocolate chips
  2. ¼ cup heavy cream
Labeled ingredients for cupcakes: cake mix, eggs, oil, water, pudding mix, milk, chips, cream

How to Make These Awesome Cupcakes

Preheat & Prep
Preheat your oven to 350°F. Line a 12-cup muffin tin with paper liners and set aside.

Make the Cupcake Batter
In a large bowl or stand mixer, combine cake mix, water, oil, and eggs. Mix on low until just combined, then bump to medium speed and mix 2–3 minutes more until smooth.

Bake
Spoon batter into liners, filling each about ½ to ⅔ full. Bake 14–16 minutes, until the edges turn light golden and a toothpick comes out clean. Cool completely before filling.

Four steps: cake mix and wet ingredients, smooth batter, filled cupcake liners, baked cupcakes on rack

Whisk the Filling
In a bowl, whisk together vanilla pudding mix and cold milk for about 2 minutes. Chill until you’re ready to use it.

Make the Ganache
Place chocolate chips and heavy cream in a microwave-safe bowl. Microwave 30 seconds, stir, then microwave another 30 seconds. Stir until smooth and glossy. Let cool to room temperature.

Four steps: pudding mix in bowl, whisked filling, chocolate chips with cream, smooth ganache

Core & Fill
Use a cupcake corer or a teaspoon to scoop a small hole from the top of each cupcake. Save the little cake pieces. Pipe or spoon pudding filling into each cupcake until level, then press the reserved cake piece back on top.

Dip in Ganache
Carefully invert each filled cupcake and dip just the top into the ganache. Place ganache side up on a wire rack and let set.

Four stages of coring, filling, and ganache dipping on cooling racks

Tips & Variations

  • Cupcakes from Scratch: Swap the cake mix for your favorite homemade vanilla cupcake recipe if you prefer totally from scratch.
  • Dairy-Free: Use coconut milk in the pudding and coconut-based cream for ganache to make dairy-free cream filled cupcakes.
  • Extra Flavors: Add a teaspoon of instant coffee granules to the ganache for a mocha twist.
  • Decorations: Sprinkle crushed graham crackers or chopped nuts on the ganache before it sets for a crunchy finish.
Cross-section of a cupcake showing creamy vanilla center and chocolate topping

FAQs

Can I use homemade pastry cream instead of pudding mix?

Yes! Homemade pastry cream makes a richer vanilla cream filling but takes a bit more time.

How long do Boston Cream Pie Cupcakes last?

tore in an airtight container in the fridge for up to 3 days. Let them come to room temperature before serving for best flavor.

Why did my ganache break?

If your ganache looks grainy or separated, it may have overheated. Stir gently off heat and let it cool slowly before dipping.

Six vanilla cupcakes with chocolate ganache on a white surface

These Boston Cream Pie Cupcakes bring together the nostalgia of a classic dessert and the fun of specialty cupcakes. Give them a try at your next gathering. You’ll love the inside-out twist on a Boston Cream Pie!

Boston Cream Pie Cupcakes

cream filled cupcakes
Indulge in Boston Cream Pie Cupcakes: moist vanilla cupcakes from scratch, filled with silky vanilla cream and topped with glossy chocolate ganache.
Marina Sestan
Prep Time 30 minutes
Bake Time 14 minutes
Total Time 44 minutes
Calories 230
Serving Size 16 Cupcakes

Ingredients

For the Cupcakes

  • 1 package yellow cake mix
  • 1 cup water
  • cup vegetable oil
  • 3 large eggs

For the Cream Filling

  • 1 6-ounce package instant vanilla pudding mix
  • 2 cups cold milk

For the Chocolate Ganache

  • ½ cup chocolate chips
  • ¼ cup heavy cream

Instructions

Preheat & Prep

  • Preheat your oven to 350°F. Line a 12-cup muffin tin with paper liners and set aside.

Make the Cupcake Batter

  • In a large bowl or stand mixer, combine cake mix, water, oil, and eggs. Mix on low until just combined, then bump to medium speed and mix 2–3 minutes more until smooth.

Bake

  • Spoon batter into liners, filling each about ½ to ⅔ full. Bake 14–16 minutes, until the edges turn light golden and a toothpick comes out clean. Cool completely before filling.

Whisk the Filling

  • In a bowl, whisk together vanilla pudding mix and cold milk for about 2 minutes. Chill until you’re ready to use it.

Make the Ganache

  • Place chocolate chips and heavy cream in a microwave-safe bowl. Microwave 30 seconds, stir, then microwave another 30 seconds. Stir until smooth and glossy. Let cool to room temperature.

Core & Fill

  • Use a cupcake corer or teaspoon to scoop a small hole from the top of each cupcake. Save the little cake pieces. Pipe or spoon pudding filling into each cupcake until level, then press the reserved cake piece back on top.

Dip in Ganache

  • Carefully invert each filled cupcake and dip just the top into the ganache. Place ganache side up on a wire rack and let set.

Notes

Can I use homemade pastry cream instead of pudding mix?
Yes! Homemade pastry cream makes a richer vanilla cream filling but takes a bit more time.
How long do Boston Cream Pie Cupcakes last?
Store in an airtight container in the fridge for up to 3 days. Let them come to room temperature before serving for best flavor.
Why did my ganache break?
If your ganache looks grainy or separated, it may have overheated. Stir gently off heat and let it cool slowly before dipping.

Nutrition

Calories: 230kcal
|
Carbohydrates: 32g
|
Protein: 3g
|
Fat: 10g
|
Saturated Fat: 4g
|
Polyunsaturated Fat: 3g
|
Sodium: 261mg
|
Potassium 92mg
|
Fiber: 0.4
|
Sugar: 19g
|
Vitamin A: 149IU
|
Vitamin C: 0.02mg
|
Calcium: 117mg
|
Iron: 1mg

Too busy to make this right now? Pin for later to your favorite Pinterest Board!

VANILLA filling cupcakes

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